Browse of TCMCG017C12348 protein

CDS

Accession Number	TCMCG017C12348
gbkey	CDS
Protein Id	OMO98062.1
Location	join(122340..122662,123230..123376,123536..123689,124318..124453,124690..124835,125494..125589,125755..125807,126394..126525,127365..127416,127516..127635,127866..128000,128366..128626,129183..129260,129464..129604,130138..130232,131165..131361,131539..132107,132293..132317,132951..133027)
Organism	Corchorus olitorius
locus_tag	COLO4_14184

Protein

Length	978aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01015387.1
Definition	cleavage and polyadenylation specificity factor subunit 1-like protein [Corchorus olitorius]
Locus_tag	COLO4_14184

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTACGCGGCGTACAAGATGATGCACTGGCCCACCGGAATCGAGTGCTGTGCCTCCGGTTTCGTCACTCACTGCCGTGCGGATTTCACGCCTCAAATTCCGCTCAATCAGACCGAAGATCTTGAATCCGAATGGCCCGCAAGGCGCGGCATTGGTCCCGTTCCCAACCTCATTGTCACTGCTGCTAATCTTCTCGAAATCTATGTCGTCAGGGTTCAAGAAGAGGGCAGCAGGGAAGCCAGAAACTCCACGGAAGCCAAGCGTGGTGGTGTTATGGATGGCGTCTCCGGGGTTTCTCTTGAGCTTGTTTGCAGTTACAGGTTGCATGGTAATGTTGAATCTATGGCGGTGCTATCTGTAGGAGGCGGTGATGGCTCTAGGAGGAGAGATTCAATTATCTTGGCCCTTCAAGATGCCAAAATTTCAGTCCTGGAGTTTGATGATTCAATCCATGGTCTTCGAACGGCCTCAATGCACTGTTTTGAGGGACCAGAGTGGCTTCATTTGAAAAGAGGGAGAGAATCATTTGCAAGGGGCCCATGGGTAAAGGTTGATCCTCAAGGCAGGTGTGGCGGCGTTCTTCTTTATGATTTGCAAATGATAATACTAAAAGCTGCTCAGGCTGGTTCTGGTTTTGTGGGAGAGGATGATGCTTTTGGATCTGGAGGTGCAGTTTCTGCCCGTATTGAGTCATCTTACATCATCAATTTAAGAGATTTGGACATGAAGCACATAAAAGACTTCATATTTGTGCATGGTTATATTGAGCCGGTGATGGTTATCCTTCATGAGCGGGAGCTCACTTGGGCTGGGCGAGTCGCTTGGAAGCACCATACTTGTATGATTTCTGCACTTAGTATCAGCACAACCTTGAAGCAGCATCCTCTCATATGGTCGGCAGTTAATCTTCCCCATGATGCTTACAAGCTACTTGCAGTTCCATCGCCGATTGGAGGTGTTCTTGTGATAAGTGCAAATACAATTCATTATCATAGTCAGTCAGCATCATGCGCACTGGCTTTAAATGGTTATGCTGTTTCTGCTGATAACAGTCCGGACCTTCCACGATCAAGTTTCAGTGTAGAACTTGATGCTGCTAATGCAACTTGGTTGCTAAATGATGTGGCCTTGCTGTCAACAAAGACAGGAGAACTACTACTGCTGACCCTTGTGTATGATGGGCGGGTTGTGCAGAGGCTTGATCTTTCCAAGTCTAAGGCTTCAGTACTCACTTCGGACATTACAACTATTGGAAATTCATTGTTCTTTCTGGGTAGTCGACTGGGAGATAGTTTGCTTGTGCAATACAGCAGTGGGTCAGGAGCATCAGCCTTGCAATCTGGTTTGAAGGAAGAGGTTGGAGATATTGAAGGTGATGTCCCTCTGGCAAAGCGAATGCGAAGGTCATCTTCTGATGCTTTGCATGATATGGTTGGGGGTGAAGAGCTTTCCTTGTATGGTTCAGCCCCAAATAACACTGAATCAGCACAGTCACCATCAAGAGATGAATGTTCTCTTGTTATCAATTTCTTCAATCCGTTAATGCTGCATGGTTCATCAGTTATGGTTATCGGTTTTCAGTCTTGTCAGGCTACTAATATTGACCCTGTTCCATTTGTGCAGAAGACATTCTTGTTTGCAGTGAGAGACTCCTTAACTAATGTTGGCCCTTTGAAGGACTTTGCATATGGATTGAGGATTAATGCTGATGCAAATGCAACTGGAATTGCCAAACAAAGTAATTATGAACTGGTGTGCTGTTCTGGTCATGGAAAGAATGGTGCTCTCTGTGTTCTTCGACAATCAATTCGTCCCGAAATGATTACCGAGGTTGAACTATCCGGTTGTAAAGGAATTTGGACTGTTTATCACAAGAGCACACGCAGTCACAGTGCTGATTTGTCTAAGATGGCTGATGATGATGATGAATATCATGCATACTTAATTATAAGTCTGGAGGCGCGTACTATGGTTCTTGAAACAGCTGATCTTTTGACAGAAGTGACTGAAAGTGTAGACTATTATGTTCAAGGAAAAACAATTGCTGCGGGAAATTTGTTTGGAAGGCGTCGAGTTATCCAGGTCTATGAACGTGGTGCTCGAATTCTAGATGGTTCTTTTATGACTCAAGAACTTAGTATTCCTTCTCCAAACTCTGAAACTGGCTCTGGTTCTGAGAGTTCTACGGTGATGTCTGTTTCTATTGCCGATCCTTATGTGTTGCTAAGAATGACTGATGGAAGCATTCTGCTCCTTGTTGGAGATCCTGCTAGTTGCACTGTTTCTATAAACACTCCAAATGCCTTTGAAGGCTCAAAGAAATTGGTATCTGCCTCTACACTATATCATGATAGAGGTCCAGAGCCATGGCTCCGGAAAGCAAGTACTGATGCATGGCTTTCCACTGGCATTGGGGAGTCCATTGATGGTGCTGATGGCGGGCCACATGATCAAGGGGACATATATTGTGTCATTTGTTATGAGAGTGGTGCTCTTGAAATATTTGATGTGCCAAATTTCAACTGTGTGTTCTCTGTGGAAAATTTTTCTTCTGGAAGAACCCACCTTGTTGATGCCTATTCACTGGAATCTTCTGAAGATTCTGAAAAAGTAATTAATAAAAGTTCTGAAGGCCAAGGCAGGAAAGAAAGTGTTCAAAACCTGAAGGTTGTTGAGTTGGCTATGCAGAGATGGTCTGGAAACCACAGTCGTCCCTTTCTGTTTGGAATATTAACAGATGGAACAATTCTTTGTTACCATGCTTACCTATTTGAGGGTTCGGAGAGTGCTTCTAAAGTTGAGGATTCAGTTACTGTTGAAAATTCTGCCAGCGGAACGGCTTCGAGTTCATCCACAGGGTGTTCTGAAGATTTGCCAAATGCCATCTACATCAAACTACGACAACTATTGGCCAGTACAAAAAGTGATCCCTAA

Protein:   MSYAAYKMMHWPTGIECCASGFVTHCRADFTPQIPLNQTEDLESEWPARRGIGPVPNLIVTAANLLEIYVVRVQEEGSREARNSTEAKRGGVMDGVSGVSLELVCSYRLHGNVESMAVLSVGGGDGSRRRDSIILALQDAKISVLEFDDSIHGLRTASMHCFEGPEWLHLKRGRESFARGPWVKVDPQGRCGGVLLYDLQMIILKAAQAGSGFVGEDDAFGSGGAVSARIESSYIINLRDLDMKHIKDFIFVHGYIEPVMVILHERELTWAGRVAWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNGYAVSADNSPDLPRSSFSVELDAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLFFLGSRLGDSLLVQYSSGSGASALQSGLKEEVGDIEGDVPLAKRMRRSSSDALHDMVGGEELSLYGSAPNNTESAQSPSRDECSLVINFFNPLMLHGSSVMVIGFQSCQATNIDPVPFVQKTFLFAVRDSLTNVGPLKDFAYGLRINADANATGIAKQSNYELVCCSGHGKNGALCVLRQSIRPEMITEVELSGCKGIWTVYHKSTRSHSADLSKMADDDDEYHAYLIISLEARTMVLETADLLTEVTESVDYYVQGKTIAAGNLFGRRRVIQVYERGARILDGSFMTQELSIPSPNSETGSGSESSTVMSVSIADPYVLLRMTDGSILLLVGDPASCTVSINTPNAFEGSKKLVSASTLYHDRGPEPWLRKASTDAWLSTGIGESIDGADGGPHDQGDIYCVICYESGALEIFDVPNFNCVFSVENFSSGRTHLVDAYSLESSEDSEKVINKSSEGQGRKESVQNLKVVELAMQRWSGNHSRPFLFGILTDGTILCYHAYLFEGSESASKVEDSVTVENSASGTASSSSTGCSEDLPNAIYIKLRQLLASTKSDP